It's physicist shorthand for
$$\frac{d}{dt} \delta q(t,\varepsilon) = \frac{d}{dt}[q(t,\varepsilon + \delta \varepsilon) - q(t,\varepsilon)] = [\frac{d}{dt}q(t,\varepsilon + \delta \varepsilon) - \frac{d}{dt}q(t,\varepsilon)] = \delta \frac{dq(t)}{dt}$$
same thing :p