Ctrl+Tab from editor to Dyalog main window doesn't cause the same bug. AutoHotkey using WinActivate to try and bring Dyalog main window to the foreground does have the same bug, but using `#WinActivateForce` makes it work. Using AutoHotkey and intercepting Alt+Tab and, if in the editor, substituting Ctrl+Tab apparently helps but it does mean you can't switch from (other program) to editor and alt tab back to (other program), only back to the main window.
#IfWinActive ahk_class DyalogEditor_{58BFFE15-4D69-4480-B2F1-6316087A1F0A}