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4:14 AM
4
Q: RDkit: While converting a *.sdf file to fingerprint, I'm facing several errors

Protima Rani Paulsuppl = Chem.SDMolSupplier('1.sdf') for mol in suppl: if mol is None: continue # print(mol.GetNumAtoms()) fps = [Chem.RDKFingerprint(x) for x in supply] I am facing many errors: ERROR: Problems encountered parsing Mol data, M END missing around line 16739 ... ERROR: Explicit valence for at...

 
 
7 hours later…
10:51 AM
5
Q: What do the indices mean in an FCIDUMP file?

fagdI generated an FCIDUMP file, which is copied below &FCI NORB=2, NELEC=2,MS2=0,UHF=.FALSE.,ORBSYM=1,5,ISYM=1, &END 6.74493103326006093745E-01 1 1 1 1 6.63472044860555665302E-01 1 1 2 2 6.63472044860555665302E-01 2 2 1 1 6.97397949820408036281E-01 2 2 2 2 1.81287535812332034624E-0...

 

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